BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB022A02LP1|AL427841
(1041 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1057 1959 0.0
>3x_Contig1057
Length = 3069
Score = 1959 bits (987), Expect = 0.0
Identities = 1014/1025 (98%), Gaps = 2/1025 (0%)
Strand = Plus / Minus
Query: 1 cattagatttagaagaacttcaaggatagccgatctgcaagaaattgcccttgctaaatt 60
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1193 cattagatttagaagaacttcaaggt--gccgatctgcaagaaattgcccttgctaaatt 1136
Query: 61 gcaacaagcggtccacgcattggggcccggtagaccagtgttcgtcgaggatactgcact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1135 gcaacaagcggtccacgcattggggcccggtagaccagtgttcgtcgaggatactgcact 1076
Query: 121 ctcattcgacgaattcaatgggttgccaggtgcgtacatcaaatggttcatcaaatcgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1075 ctcattcgacgaattcaatgggttgccaggtgcgtacatcaaatggttcatcaaatcgat 1016
Query: 181 ggggcttgccaaagtcgtgaaaatgctcgattcattcgagaataaaggcgcatacgcgat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1015 ggggcttgccaaagtcgtgaaaatgctcgattcattcgagaataaaggcgcatacgcgat 956
Query: 241 cactacgatcgcatacgctgactctaagggccaattacacgtattccaaggtaagactca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 955 cactacgatcgcatacgctgactctaagggccaattacacgtattccaaggtaagactca 896
Query: 301 cggaaccatcgttgacagtagaggtcacaccaatttcggttgggattccatcttccaacc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 895 cggaaccatcgttgacagtagaggtcacaccaatttcggttgggattccatcttccaacc 836
Query: 361 ggatgaatcacaaaacaacgaaacgtatgccgaaatggctaaagaagacaagaacaaaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 835 ggatgaatcacaaaacaacgaaacgtatgccgaaatggctaaagaagacaagaacaaaat 776
Query: 421 ctctcagcgtggcagagcattcgcccaattgaaagaatatctatacaacactggtatata 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 ctctcagcgtggcagagcattcgcccaattgaaagaatatctatacaacactggtatata 716
Query: 481 agactagtaagtatatcctgtgtatgagtcaactccagactatgagtaactaactgcctg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 agactagtaagtatatcctgtgtatgagtcaactccagactatgagtaactaactgcctg 656
Query: 541 tcgctggaattcaaatatcgttaccctactctcttatgtactgaaaaattttgatgagca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 tcgctggaattcaaatatcgttaccctactctcttatgtactgaaaaattttgatgagca 596
Query: 601 tctaagcatttccaatgttaacacaattcaagaatacacattgacagatcaacaaggcga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 tctaagcatttccaatgttaacacaattcaagaatacacattgacagatcaacaaggcga 536
Query: 661 gaaattgaactgtaaaacactgattaaggactcaggatcccagcggcaagagtgtataga 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 gaaattgaactgtaaaacactgattaaggactcaggatcccagcggcaagagtgtataga 476
Query: 721 gcccgggagtatagattcagagggagtactgagaagaaagcgttctgttttatctgtttt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 gcccgggagtatagattcagagggagtactgagaagaaagcgttctgttttatctgtttt 416
Query: 781 actttcttttgtgttaaacatacaagtttcattagagaacggaaattcaaacgatatata 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 actttcttttgtgttaaacatacaagtttcattagagaacggaaattcaaacgatatata 356
Query: 841 tagagttcggttttggatccgctcagtggcaagccagggggacaaggacttagtatttat 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 tagagttcggttttggatccgctcagtggcaagccagggggacaaggacttagtatttat 296
Query: 901 ttganattcmgnagaagnagnagnagnagnagaaggtatgtcacatatccagcaggcggt 960
|||| |||| | ||||| || || || || ||||||||||||||||||||||||||||||
Sbjct: 295 ttgaaattcagaagaagaagaagaagaagaagaaggtatgtcacatatccagcaggcggt 236
Query: 961 cgatattgccaattcttctaccgctggaaatgatttgaagaaacaagcacttgatttttt 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 cgatattgccaattcttctaccgctggaaatgatttgaagaaacaagcacttgatttttt 176
Query: 1021 acagc 1025
|||||
Sbjct: 175 acagc 171
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6931
Number of Sequences: 1807
Number of extensions: 6931
Number of successful extensions: 57
Number of sequences better than 1.0e-20: 1
length of query: 1041
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1025
effective length of database: 10,329,639
effective search space: 10587879975
effective search space used: 10587879975
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 51 (101.7 bits)